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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS15625 from
Dickeya dianthicola ME23
membrane protein YpdK
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS10840
thymidine kinase
no
0.55
2
DZA65
_RS14110
EmmdR/YeeO family multidrug/toxin efflux MATE transporter
no
0.55
3
DZA65
_RS11880
two-component system response regulator PhoP
no
0.55
4
DZA65
_RS13135
YnhF family membrane protein
no
0.52
5
DZA65
_RS02275
ABC transporter permease
no
0.52
6
DZA65
_RS04535
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
no
0.51
7
DZA65
_RS04545
helix-turn-helix transcriptional regulator
no
0.51
8
DZA65
_RS22115
SDR family oxidoreductase
no
0.50
9
DZA65
_RS09740
alpha/beta hydrolase
no
0.49
10
DZA65
_RS06195
hypothetical protein
no
0.49
11
DZA65
_RS20815
ribosome-associated heat shock protein Hsp15
no
0.49
12
DZA65
_RS18615
LysR family transcriptional regulator
no
0.49
13
DZA65
_RS02115
AlpA family transcriptional regulator
no
0.49
14
DZA65
_RS02820
tyrosine-type recombinase/integrase
no
0.49
15
DZA65
_RS14400
type IV secretion system protein
no
0.49
16
DZA65
_RS07350
tannase/feruloyl esterase family alpha/beta hydrolase
no
0.48
17
DZA65
_RS10720
GlsB/YeaQ/YmgE family stress response membrane protein
no
0.47
18
DZA65
_RS14105
protein DsrB
no
0.46
19
DZA65
_RS20975
hypothetical protein
no
0.46
20
DZA65
_RS04300
LuxR family transcriptional regulator
no
0.46
Or look for
negative cofitness