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  • Top cofit genes for DZA65_RS15585 from Dickeya dianthicola ME23

    TonB-dependent siderophore receptor
    SEED: Ferrichrome-iron receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15540 Fe2+-enterobactin ABC transporter substrate-binding protein 0.79 0.89
    2 DZA65_RS17390 inner membrane protein YpjD 0.69 0.89
    3 DZA65_RS15555 iron-enterobactin ABC transporter permease 0.65 0.82
    4 DZA65_RS20915 glycogen synthase GlgA 0.77 0.80
    5 DZA65_RS15550 Fe(3+)-siderophore ABC transporter permease 0.80 0.80
    6 DZA65_RS15580 enterochelin esterase 0.78 0.77
    7 DZA65_RS19270 acetolactate synthase large subunit no 0.76
    8 DZA65_RS06220 hypothetical protein 0.50 0.76
    9 DZA65_RS15545 enterobactin transporter EntS 0.47 0.74
    10 DZA65_RS09025 iron ABC transporter substrate-binding protein no 0.73
    11 DZA65_RS21530 glycerol kinase GlpK 0.69 0.70
    12 DZA65_RS09030 iron ABC transporter permease no 0.70
    13 DZA65_RS01580 outer membrane-stress sensor serine endopeptidase DegS no 0.69
    14 DZA65_RS19345 Co2+/Mg2+ efflux protein ApaG 0.52 0.69
    15 DZA65_RS16930 RNA polymerase sigma factor RpoE 0.63 0.64
    16 DZA65_RS21525 aquaporin family protein 0.69 0.64
    17 DZA65_RS03415 DUF1435 domain-containing protein no 0.63
    18 DZA65_RS13305 Fe-S cluster assembly protein SufB 0.47 0.63
    19 DZA65_RS10825 two-component system response regulator RssB 0.39 0.63
    20 DZA65_RS19645 class 1 fructose-bisphosphatase no 0.63

    Or look for negative cofitness