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  • Top cofit genes for DZA65_RS15395 from Dickeya dianthicola ME23

    tripartite tricarboxylate transporter substrate binding protein
    SEED: Tricarboxylate transport protein TctC
    KEGG: putative tricarboxylic transport membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS03335 YggS family pyridoxal phosphate-dependent enzyme no 0.53
    2 DZA65_RS05800 AAA family ATPase no 0.48
    3 DZA65_RS12340 amidohydrolase no 0.47
    4 DZA65_RS04475 alpha/beta hydrolase no 0.47
    5 DZA65_RS11920 type II toxin-antitoxin system RelE/ParE family toxin no 0.47
    6 DZA65_RS16000 HAAAP family serine/threonine permease no 0.47
    7 DZA65_RS04965 hypothetical protein no 0.47
    8 DZA65_RS17770 acireductone dioxygenase no 0.46
    9 DZA65_RS22195 ribosome-dependent GTPase TypA 0.36 0.46
    10 DZA65_RS16655 cytoskeleton protein RodZ 0.56 0.45
    11 DZA65_RS22120 tetratricopeptide repeat protein no 0.45
    12 DZA65_RS13750 glucans biosynthesis glucosyltransferase MdoH no 0.44
    13 DZA65_RS17865 NCS1 family nucleobase:cation symporter-1 0.62 0.44
    14 DZA65_RS12195 PAS domain-containing protein no 0.44
    15 DZA65_RS08285 ABC transporter substrate-binding protein no 0.43
    16 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.43
    17 DZA65_RS22955 hypothetical protein no 0.43
    18 DZA65_RS01920 DUF1311 domain-containing protein no 0.43
    19 DZA65_RS13755 glucan biosynthesis protein G no 0.42
    20 DZA65_RS00365 DMT family transporter no 0.42

    Or look for negative cofitness