Top cofit genes for DZA65_RS14780 from Dickeya dianthicola ME23

multidrug efflux RND transporter permease subunit
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Rank Hit Name Description Conserved? Cofitness  
1 DZA65_RS10270 ribonuclease T2 no 0.86
2 DZA65_RS19525 murein transglycosylase no 0.72
3 DZA65_RS14785 efflux RND transporter periplasmic adaptor subunit 0.38 0.71
4 DZA65_RS12820 PAS domain-containing protein no 0.71
5 DZA65_RS08990 excinuclease ABC subunit B no 0.69
6 DZA65_RS05360 murein transglycosylase A no 0.69
7 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase no 0.68
8 DZA65_RS01680 penicillin-binding protein activator 0.19 0.68
9 DZA65_RS20755 SPOR domain-containing protein no 0.68
10 DZA65_RS03330 EamA family transporter no 0.67
11 DZA65_RS19620 deoxyribonuclease I no 0.67
12 DZA65_RS16165 MdtB/MuxB family multidrug efflux RND transporter permease subunit no 0.66
13 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC no 0.64
14 DZA65_RS19695 N-acetylmuramoyl-L-alanine amidase AmiB no 0.62
15 DZA65_RS16910 elongation factor 4 0.46 0.62
16 DZA65_RS01315 endonuclease no 0.62
17 DZA65_RS16945 ATP-dependent RNA helicase SrmB 0.44 0.62
18 DZA65_RS13530 transcription-repair coupling factor 0.44 0.62
19 DZA65_RS02480 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR no 0.61
20 DZA65_RS20795 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.53 0.61

Or look for negative cofitness