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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS13465 from
Dickeya dianthicola ME23
L,D-transpeptidase
SEED: L,D-transpeptidase YcbB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS13450
aspartate/tyrosine/aromatic aminotransferase
0.59
0.69
2
DZA65
_RS01725
3',5'-cyclic-AMP phosphodiesterase
0.72
0.63
3
DZA65
_RS22350
transcriptional regulator AsnC
0.63
0.59
4
DZA65
_RS22335
low affinity potassium transporter Kup
0.52
0.56
5
DZA65
_RS19515
non-canonical purine NTP phosphatase
no
0.56
6
DZA65
_RS01630
FAD-dependent oxidoreductase
no
0.54
7
DZA65
_RS01510
RNA polymerase factor sigma-54
no
0.53
8
DZA65
_RS01635
glutamate synthase large subunit
no
0.53
9
DZA65
_RS02680
heavy metal translocating P-type ATPase
no
0.52
10
DZA65
_RS00895
phosphoenolpyruvate carboxylase
0.54
0.51
11
DZA65
_RS01365
sodium/pantothenate symporter
no
0.50
12
DZA65
_RS17165
aspartate 1-decarboxylase
no
0.49
13
DZA65
_RS09600
sugar transporter
0.66
0.49
14
DZA65
_RS02765
ATPase AAA
no
0.49
15
DZA65
_RS10725
YeaH/YhbH family protein
0.53
0.49
16
DZA65
_RS17160
pantoate--beta-alanine ligase
no
0.49
17
DZA65
_RS22210
nitrogen regulation protein NR(I)
0.56
0.48
18
DZA65
_RS03850
MurR/RpiR family transcriptional regulator
no
0.48
19
DZA65
_RS10165
DUF496 family protein
no
0.47
20
DZA65
_RS11145
ROK family transcriptional regulator
0.73
0.47
Or look for
negative cofitness