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  • Top cofit genes for DZA65_RS13465 from Dickeya dianthicola ME23

    L,D-transpeptidase
    SEED: L,D-transpeptidase YcbB

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.59 0.69
    2 DZA65_RS01725 3',5'-cyclic-AMP phosphodiesterase 0.72 0.63
    3 DZA65_RS22350 transcriptional regulator AsnC 0.63 0.59
    4 DZA65_RS22335 low affinity potassium transporter Kup 0.52 0.56
    5 DZA65_RS19515 non-canonical purine NTP phosphatase no 0.56
    6 DZA65_RS01630 FAD-dependent oxidoreductase no 0.54
    7 DZA65_RS01510 RNA polymerase factor sigma-54 no 0.53
    8 DZA65_RS01635 glutamate synthase large subunit no 0.53
    9 DZA65_RS02680 heavy metal translocating P-type ATPase no 0.52
    10 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.54 0.51
    11 DZA65_RS01365 sodium/pantothenate symporter no 0.50
    12 DZA65_RS17165 aspartate 1-decarboxylase no 0.49
    13 DZA65_RS09600 sugar transporter 0.66 0.49
    14 DZA65_RS02765 ATPase AAA no 0.49
    15 DZA65_RS10725 YeaH/YhbH family protein 0.53 0.49
    16 DZA65_RS17160 pantoate--beta-alanine ligase no 0.49
    17 DZA65_RS22210 nitrogen regulation protein NR(I) 0.56 0.48
    18 DZA65_RS03850 MurR/RpiR family transcriptional regulator no 0.48
    19 DZA65_RS10165 DUF496 family protein no 0.47
    20 DZA65_RS11145 ROK family transcriptional regulator 0.73 0.47

    Or look for negative cofitness