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  • Top cofit genes for DZA65_RS12995 from Dickeya dianthicola ME23

    exoribonuclease II
    SEED: Exoribonuclease II (EC 3.1.13.1)
    KEGG: exoribonuclease II

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH no 0.63
    2 DZA65_RS17215 polyamine aminopropyltransferase 0.70 0.62
    3 DZA65_RS19730 GDP-mannose 4,6-dehydratase no 0.62
    4 DZA65_RS19750 hypothetical protein no 0.62
    5 DZA65_RS19755 glycosyltransferase no 0.60
    6 DZA65_RS19725 phosphomannomutase/phosphoglucomutase 0.60 0.60
    7 DZA65_RS03625 polysaccharide biosynthesis protein no 0.59
    8 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase no 0.59
    9 DZA65_RS18405 ribonuclease R 0.87 0.58
    10 DZA65_RS19745 GDP-L-fucose synthase no 0.58
    11 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.71 0.56
    12 DZA65_RS11120 mannose-6-phosphate isomerase 0.57 0.56
    13 DZA65_RS03630 NAD-dependent epimerase/dehydratase family protein no 0.56
    14 DZA65_RS04260 GDP-mannose pyrophosphatase NudK no 0.56
    15 DZA65_RS06465 outer membrane protein assembly factor BamC 0.62 0.55
    16 DZA65_RS19740 ABC transporter ATP-binding protein no 0.54
    17 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG no 0.53
    18 DZA65_RS19735 ABC transporter permease no 0.53
    19 DZA65_RS16610 IMP dehydrogenase no 0.53
    20 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.52

    Or look for negative cofitness