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  • Top cofit genes for DZA65_RS12865 from Dickeya dianthicola ME23

    peptide ABC transporter substrate-binding protein
    SEED: Periplasmic Murein Peptide-Binding Protein MppA
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS13320 hotdog fold thioesterase no 0.49
    2 DZA65_RS11375 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha no 0.49
    3 DZA65_RS10460 VOC family protein 0.52 0.48
    4 DZA65_RS05390 transcriptional regulator GcvA 0.70 0.45
    5 DZA65_RS15405 tripartite tricarboxylate transporter permease no 0.44
    6 DZA65_RS11275 hypothetical protein no 0.43
    7 DZA65_RS05815 phosphate regulon sensor histidine kinase PhoR no 0.42
    8 DZA65_RS05090 hypothetical protein no 0.41
    9 DZA65_RS08825 Hcp family type VI secretion system effector no 0.41
    10 DZA65_RS04225 RnfH family protein no 0.40
    11 DZA65_RS04625 IS4 family transposase no 0.40
    12 DZA65_RS01175 DUF1127 domain-containing protein no 0.40
    13 DZA65_RS14850 carbamoyltransferase HypF no 0.40
    14 DZA65_RS19885 p-aminobenzoyl-glutamate transporter no 0.40
    15 DZA65_RS14775 TolC family protein no 0.39
    16 DZA65_RS14720 pyridoxal phosphate-dependent aminotransferase no 0.39
    17 DZA65_RS06450 thioredoxin-dependent thiol peroxidase 0.35 0.39
    18 DZA65_RS10125 triphosphoribosyl-dephospho-CoA synthase CitG no 0.39
    19 DZA65_RS01250 DUF1481 domain-containing protein no 0.39
    20 DZA65_RS14760 nitrate ABC transporter permease no 0.39

    Or look for negative cofitness