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  • Top cofit genes for DZA65_RS12700 from Dickeya dianthicola ME23

    PAS domain-containing protein
    SEED: Aerotaxis sensor receptor protein
    KEGG: aerotaxis receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS14205 hypothetical protein no 0.41
    2 DZA65_RS08550 type VI secretion system baseplate subunit TssE no 0.34
    3 DZA65_RS18140 nucleoside triphosphate pyrophosphohydrolase no 0.34
    4 DZA65_RS14550 alpha/beta hydrolase no 0.34
    5 DZA65_RS21345 acetolactate synthase 2 small subunit no 0.34
    6 DZA65_RS07795 4Fe-4S dicluster domain-containing protein 0.60 0.33
    7 DZA65_RS07175 glycosyltransferase no 0.33
    8 DZA65_RS05670 L-tyrosine/L-tryptophan isonitrile synthase family protein no 0.32
    9 DZA65_RS16400 hypothetical protein 0.32 0.32
    10 DZA65_RS10475 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB no 0.32
    11 DZA65_RS09250 allophanate hydrolase subunit 1 no 0.32
    12 DZA65_RS01400 oxidoreductase no 0.32
    13 DZA65_RS15445 YfcL family protein no 0.31
    14 DZA65_RS19305 DNA polymerase II 0.38 0.31
    15 DZA65_RS11200 Expansin-YoaJ no 0.31
    16 DZA65_RS00860 phospholipid:lipid A palmitoyltransferase no 0.31
    17 DZA65_RS17840 AtzE family amidohydrolase no 0.31
    18 DZA65_RS19825 DMT family transporter no 0.30
    19 DZA65_RS04070 ogr/Delta-like zinc finger family protein no 0.30
    20 DZA65_RS10685 hypothetical protein no 0.30

    Or look for negative cofitness