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  • Top cofit genes for DZA65_RS12680 from Dickeya dianthicola ME23

    late control D family protein
    SEED: Gene D protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS09300 GlpM family protein 0.57 0.50
    2 DZA65_RS21655 sn-glycerol-3-phosphate ABC transporter permease UgpE no 0.48
    3 DZA65_RS03915 nucleoside recognition family protein no 0.44
    4 DZA65_RS18155 two-component sensor histidine kinase BarA 0.42 0.44
    5 DZA65_RS04555 TIGR00645 family protein 0.68 0.43
    6 DZA65_RS00205 DNA-3-methyladenine glycosylase I 0.58 0.43
    7 DZA65_RS14100 HAMP domain-containing protein no 0.43
    8 DZA65_RS20065 HlyD family efflux transporter periplasmic adaptor subunit no 0.42
    9 DZA65_RS12585 phage tail protein 0.96 0.42
    10 DZA65_RS11610 Slp family lipoprotein no 0.41
    11 DZA65_RS21855 endoglucanase no 0.41
    12 DZA65_RS04465 4Fe-4S dicluster domain-containing protein 0.55 0.41
    13 DZA65_RS09575 PTS fructose transporter subunit IIBC no 0.40
    14 DZA65_RS20250 methionine synthase no 0.40
    15 DZA65_RS20785 PilN domain-containing protein no 0.40
    16 DZA65_RS13585 beta-N-acetylhexosaminidase no 0.39
    17 DZA65_RS06190 bifunctional UDP-sugar hydrolase/5'-nucleotidase no 0.38
    18 DZA65_RS03555 hypothetical protein no 0.38
    19 DZA65_RS13065 aconitate hydratase AcnA 0.39 0.38
    20 DZA65_RS20815 ribosome-associated heat shock protein Hsp15 0.25 0.38

    Or look for negative cofitness