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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS12570 from
Dickeya dianthicola ME23
replication endonuclease
SEED: Phage replication protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS02250
transketolase
no
0.39
2
DZA65
_RS00740
nucleoid occlusion factor SlmA
no
0.39
3
DZA65
_RS21830
hypothetical protein
no
0.39
4
DZA65
_RS17015
PTS lactose/cellobiose transporter subunit IIA
0.23
0.38
5
DZA65
_RS04955
cysteinyl-tRNA synthetase
no
0.38
6
DZA65
_RS08260
sensor domain-containing diguanylate cyclase
no
0.37
7
DZA65
_RS06920
cell division protein CpoB
no
0.36
8
DZA65
_RS20860
RNA-binding transcriptional accessory protein
no
0.36
9
DZA65
_RS09865
hydroxylamine reductase
no
0.36
10
DZA65
_RS08580
DotU family type IV/VI secretion system protein
no
0.36
11
DZA65
_RS09555
proteinase inhibitor
no
0.35
12
DZA65
_RS20755
SPOR domain-containing protein
no
0.35
13
DZA65
_RS18555
LysR family transcriptional regulator
0.67
0.34
14
DZA65
_RS14785
efflux RND transporter periplasmic adaptor subunit
no
0.34
15
DZA65
_RS19870
amino acid ABC transporter ATP-binding protein
0.82
0.34
16
DZA65
_RS04915
type 4b pilus protein PilO2
no
0.34
17
DZA65
_RS11860
NUDIX hydrolase
no
0.34
18
DZA65
_RS15495
hypothetical protein
no
0.33
19
DZA65
_RS18275
HAMP domain-containing protein
no
0.33
20
DZA65
_RS09175
DUF1349 domain-containing protein
no
0.33
Or look for
negative cofitness