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  • Top cofit genes for DZA65_RS12350 from Dickeya dianthicola ME23

    ABC transporter ATP-binding protein
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06125 multidrug efflux transporter transcriptional repressor AcrR no 0.52
    2 DZA65_RS12585 phage tail protein no 0.50
    3 DZA65_RS05500 molecular chaperone Skp no 0.47
    4 DZA65_RS00830 divergent polysaccharide deacetylase family protein no 0.45
    5 DZA65_RS14785 efflux RND transporter periplasmic adaptor subunit no 0.43
    6 DZA65_RS11760 metal-dependent hydrolase no 0.43
    7 DZA65_RS21585 Pr2TM family membrane protein no 0.43
    8 DZA65_RS17255 ribonuclease HI no 0.42
    9 DZA65_RS05615 aspartyl/asparaginyl beta-hydroxylase domain-containing protein no 0.42
    10 DZA65_RS10270 ribonuclease T2 no 0.41
    11 DZA65_RS13570 glycine zipper 2TM domain-containing protein no 0.40
    12 DZA65_RS00510 hypothetical protein no 0.40
    13 DZA65_RS03835 VOC family protein no 0.40
    14 DZA65_RS03470 membrane protein no 0.40
    15 DZA65_RS20075 hypothetical protein no 0.40
    16 DZA65_RS03490 bifunctional protein-disulfide isomerase/oxidoreductase DsbC no 0.39
    17 DZA65_RS15505 long-chain fatty acid transporter FadL no 0.39
    18 DZA65_RS02585 hydroxyisourate hydrolase no 0.39
    19 DZA65_RS16740 ABC transporter substrate-binding protein no 0.39
    20 DZA65_RS14780 multidrug efflux RND transporter permease subunit no 0.38

    Or look for negative cofitness