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Cofit
Top cofit genes for DZA65_RS12295 from
Dickeya dianthicola ME23
PLP-dependent transferase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS00985
3'-5' ssDNA/RNA exonuclease TatD
no
0.44
2
DZA65
_RS08065
CRISPR-associated endonuclease Cas3''
no
0.44
3
DZA65
_RS09420
DUF927 domain-containing protein
no
0.44
4
DZA65
_RS22415
right-handed parallel beta-helix repeat-containing protein
no
0.42
5
DZA65
_RS16795
polysaccharide lyase
no
0.42
6
DZA65
_RS11165
glycosyl transferase
no
0.41
7
DZA65
_RS14195
SDR family NAD(P)-dependent oxidoreductase
no
0.40
8
DZA65
_RS01185
PLP-dependent aminotransferase family protein
no
0.39
9
DZA65
_RS04410
anaerobic nitric oxide reductase flavorubredoxin
no
0.39
10
DZA65
_RS13405
FMNH2-dependent alkanesulfonate monooxygenase
no
0.39
11
DZA65
_RS14200
SDR family NAD(P)-dependent oxidoreductase
no
0.38
12
DZA65
_RS14430
P-type DNA transfer ATPase VirB11
no
0.38
13
DZA65
_RS13635
endolytic transglycosylase MltG
no
0.37
14
DZA65
_RS16030
phosphate ABC transporter ATP-binding protein
no
0.37
15
DZA65
_RS22655
MBL fold metallo-hydrolase
no
0.36
16
DZA65
_RS05170
hypothetical protein
no
0.36
17
DZA65
_RS11770
osmotically-inducible lipoprotein OsmE
no
0.35
18
DZA65
_RS07545
hypothetical protein
no
0.35
19
DZA65
_RS13360
intermembrane transport protein PqiB
no
0.35
20
DZA65
_RS11780
drug/metabolite DMT transporter permease
no
0.34
Or look for
negative cofitness