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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS12230 from
Dickeya dianthicola ME23
HrpP protein
SEED: type III secretion protein HrpP
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS11510
hypothetical protein
no
0.51
2
DZA65
_RS08495
hypothetical protein
no
0.49
3
DZA65
_RS07455
IS3 family transposase
no
0.47
4
DZA65
_RS04300
LuxR family transcriptional regulator
no
0.46
5
DZA65
_RS14665
LysR family transcriptional regulator
no
0.45
6
DZA65
_RS20185
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
no
0.45
7
DZA65
_RS15850
histidine utilization repressor
no
0.44
8
DZA65
_RS04305
cytosine permease
no
0.41
9
DZA65
_RS04815
hypothetical protein
no
0.41
10
DZA65
_RS05395
DUF423 domain-containing protein
no
0.41
11
DZA65
_RS21040
threonine export protein RhtC
no
0.40
12
DZA65
_RS19275
acetolactate synthase small subunit
no
0.39
13
DZA65
_RS16770
3-phenylpropionate MFS transporter
no
0.39
14
DZA65
_RS16365
hypothetical protein
no
0.39
15
DZA65
_RS17920
thioredoxin TrxC
no
0.39
16
DZA65
_RS11630
YoaH family protein
no
0.39
17
DZA65
_RS18615
LysR family transcriptional regulator
no
0.38
18
DZA65
_RS11770
osmotically-inducible lipoprotein OsmE
no
0.38
19
DZA65
_RS00985
3'-5' ssDNA/RNA exonuclease TatD
no
0.38
20
DZA65
_RS16960
tRNA-Ala
no
0.38
Or look for
negative cofitness