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  • Top cofit genes for DZA65_RS11720 from Dickeya dianthicola ME23

    2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
    SEED: 5-keto-D-gluconate 5-reductase (EC 1.1.1.69)
    KEGG: 2-deoxy-D-gluconate 3-dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS11715 5-dehydro-4-deoxy-D-glucuronate isomerase 0.92 0.95
    2 DZA65_RS21825 sugar kinase 0.97 0.94
    3 DZA65_RS10585 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.98 0.93
    4 DZA65_RS10580 glucose-6-phosphate dehydrogenase 0.80 0.89
    5 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase 0.71 0.84
    6 DZA65_RS07110 dTDP-glucose 4,6-dehydratase no 0.82
    7 DZA65_RS07465 MFS transporter 0.72 0.81
    8 DZA65_RS06860 succinate--CoA ligase subunit alpha no 0.81
    9 DZA65_RS16610 IMP dehydrogenase 0.67 0.81
    10 DZA65_RS03625 polysaccharide biosynthesis protein 0.62 0.80
    11 DZA65_RS11710 cupin domain-containing protein 0.91 0.79
    12 DZA65_RS13330 AI-2E family transporter YdiK 0.72 0.79
    13 DZA65_RS19740 ABC transporter ATP-binding protein no 0.79
    14 DZA65_RS11655 TerC family protein 0.68 0.78
    15 DZA65_RS06990 UDP-glucose 4-epimerase GalE 0.95 0.78
    16 DZA65_RS02940 DedA family protein 0.30 0.77
    17 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase 0.78 0.77
    18 DZA65_RS19745 GDP-L-fucose synthase no 0.77
    19 DZA65_RS03635 sugar transferase no 0.77
    20 DZA65_RS19735 ABC transporter permease 0.65 0.76

    Or look for negative cofitness