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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS11705 from
Dickeya dianthicola ME23
yfeABCD regulator yfeE
SEED: Putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS06990
UDP-glucose 4-epimerase GalE
0.50
0.43
2
DZA65
_RS06065
P-II family nitrogen regulator
0.59
0.43
3
DZA65
_RS15340
colicin V production protein
no
0.42
4
DZA65
_RS11335
HAMP domain-containing protein
no
0.41
5
DZA65
_RS08935
NAD-dependent malic enzyme
0.28
0.41
6
DZA65
_RS06465
outer membrane protein assembly factor BamC
0.50
0.41
7
DZA65
_RS17215
polyamine aminopropyltransferase
0.52
0.40
8
DZA65
_RS08145
type II toxin-antitoxin system HicA family toxin
no
0.40
9
DZA65
_RS06985
galactose-1-phosphate uridylyltransferase
0.48
0.40
10
DZA65
_RS15140
DUF1804 family protein
no
0.40
11
DZA65
_RS22205
nitrogen regulation protein NR(II)
0.42
0.40
12
DZA65
_RS16015
IS200/IS605 family transposase
no
0.40
13
DZA65
_RS21825
sugar kinase
0.60
0.39
14
DZA65
_RS13845
FkbM family methyltransferase
no
0.39
15
DZA65
_RS01680
penicillin-binding protein activator
0.80
0.39
16
DZA65
_RS05240
oxidative damage protection protein
no
0.39
17
DZA65
_RS01915
hypothetical protein
no
0.39
18
DZA65
_RS22870
hypothetical protein
no
0.38
19
DZA65
_RS07115
glucose-1-phosphate thymidylyltransferase RfbA
no
0.38
20
DZA65
_RS06765
potassium-transporting ATPase subunit KdpC
no
0.38
Or look for
negative cofitness