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  • Top cofit genes for DZA65_RS11690 from Dickeya dianthicola ME23

    transcription antiterminator/RNA stability regulator CspE
    SEED: Cold shock protein CspC
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15190 hypothetical protein no 0.50
    2 DZA65_RS09585 YeiH family putative sulfate export transporter no 0.49
    3 DZA65_RS08745 flavin reductase family protein no 0.47
    4 DZA65_RS21140 amidohydrolase no 0.46
    5 DZA65_RS15010 hypothetical protein no 0.45
    6 DZA65_RS05630 hypothetical protein no 0.45
    7 DZA65_RS22210 nitrogen regulation protein NR(I) 0.43 0.45
    8 DZA65_RS13610 malate/lactate/ureidoglycolate dehydrogenase no 0.45
    9 DZA65_RS16715 Fe-S cluster assembly scaffold IscU no 0.45
    10 DZA65_RS20330 DUF494 domain-containing protein no 0.45
    11 DZA65_RS19560 helix-turn-helix domain-containing protein no 0.44
    12 DZA65_RS01220 Rsd/AlgQ family anti-sigma factor 0.67 0.43
    13 DZA65_RS15380 4-phosphoerythronate dehydrogenase PdxB 0.60 0.42
    14 DZA65_RS07940 hypothetical protein no 0.41
    15 DZA65_RS06520 deaminated glutathione amidase no 0.41
    16 DZA65_RS22580 amino acid ABC transporter permease no 0.41
    17 DZA65_RS04940 lytic transglycosylase domain-containing protein no 0.40
    18 DZA65_RS13420 aminopeptidase N 0.74 0.40
    19 DZA65_RS03705 hypothetical protein no 0.39
    20 DZA65_RS06360 ABC transporter ATP-binding protein no 0.39

    Or look for negative cofitness