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Cofit
Top cofit genes for DZA65_RS11210 from
Dickeya dianthicola ME23
TetR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS16350
lysozyme
no
0.52
2
DZA65
_RS05170
hypothetical protein
no
0.47
3
DZA65
_RS20190
fumarate reductase subunit FrdC
no
0.45
4
DZA65
_RS00570
IS3 family transposase
no
0.44
5
DZA65
_RS09500
16S rRNA pseudouridine(516) synthase RsuA
no
0.44
6
DZA65
_RS06890
tol-pal system-associated acyl-CoA thioesterase
no
0.43
7
DZA65
_RS17085
serine endoprotease DegP
no
0.43
8
DZA65
_RS03985
phage capsid size determination protein
no
0.43
9
DZA65
_RS11555
hypothetical protein
no
0.43
10
DZA65
_RS07260
ABC transporter substrate-binding protein
no
0.42
11
DZA65
_RS00240
urea carboxylase-associated family protein
no
0.42
12
DZA65
_RS06730
LexA regulated protein
no
0.42
13
DZA65
_RS04980
integrating conjugative element protein
no
0.40
14
DZA65
_RS10715
hypothetical protein
no
0.40
15
DZA65
_RS14350
DUF2857 domain-containing protein
no
0.40
16
DZA65
_RS18830
hypothetical protein
no
0.40
17
DZA65
_RS11075
arabinose ABC transporter substrate-binding protein
no
0.39
18
DZA65
_RS14695
glycosyltransferase
no
0.39
19
DZA65
_RS18385
methyl-accepting chemotaxis protein
no
0.39
20
DZA65
_RS17870
allophanate hydrolase
no
0.39
Or look for
negative cofitness