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  • Top cofit genes for DZA65_RS11115 from Dickeya dianthicola ME23

    YdgA family protein
    SEED: Putative GTP-binding protein YdgA

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS12155 lytic murein transglycosylase no 0.47
    2 DZA65_RS02580 acetyltransferase no 0.45
    3 DZA65_RS17610 NAD(P)H-dependent oxidoreductase no 0.42
    4 DZA65_RS18735 excinuclease ABC subunit UvrA 0.43 0.42
    5 DZA65_RS07900 ABC transporter substrate-binding protein 0.45 0.42
    6 DZA65_RS00725 DUF202 domain-containing protein no 0.42
    7 DZA65_RS01345 hypothetical protein no 0.41
    8 DZA65_RS04795 hypothetical protein no 0.40
    9 DZA65_RS18315 DUF1107 domain-containing protein 0.47 0.40
    10 DZA65_RS05790 recombination-associated protein RdgC no 0.40
    11 DZA65_RS04105 phage tail protein no 0.40
    12 DZA65_RS06245 2Fe-2S ferredoxin-like protein no 0.39
    13 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ no 0.39
    14 DZA65_RS20125 LysR family transcriptional regulator no 0.39
    15 DZA65_RS15685 type II secretion system protein GspC no 0.38
    16 DZA65_RS03850 MurR/RpiR family transcriptional regulator no 0.37
    17 DZA65_RS11545 SpoVR family protein 0.51 0.37
    18 DZA65_RS09295 putative acyl-CoA thioester hydrolase no 0.37
    19 DZA65_RS20040 pyruvate:ferredoxin (flavodoxin) oxidoreductase no 0.37
    20 DZA65_RS07495 alanine--glyoxylate aminotransferase family protein no 0.37

    Or look for negative cofitness