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  • Top cofit genes for DZA65_RS11070 from Dickeya dianthicola ME23

    ribulokinase
    SEED: Ribulokinase (EC 2.7.1.16)
    KEGG: L-ribulokinase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS18060 adenylyl-sulfate kinase 0.47 0.54
    2 DZA65_RS01465 DUF1543 domain-containing protein no 0.50
    3 DZA65_RS15140 DUF1804 family protein no 0.48
    4 DZA65_RS18330 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase no 0.48
    5 DZA65_RS06520 deaminated glutathione amidase no 0.45
    6 DZA65_RS11230 serralysin family metalloprotease no 0.45
    7 DZA65_RS06245 2Fe-2S ferredoxin-like protein no 0.44
    8 DZA65_RS08305 LysR family transcriptional regulator no 0.43
    9 DZA65_RS04615 alpha/beta hydrolase no 0.42
    10 DZA65_RS08080 AcsD protein no 0.42
    11 DZA65_RS00015 DNA replication/repair protein RecF 0.67 0.42
    12 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.52 0.41
    13 DZA65_RS13610 malate/lactate/ureidoglycolate dehydrogenase no 0.41
    14 DZA65_RS05995 hypothetical protein no 0.40
    15 DZA65_RS07970 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ 0.32 0.40
    16 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase no 0.40
    17 DZA65_RS12520 membrane integrity lipid transport subunit YebS no 0.39
    18 DZA65_RS09120 class IV adenylate cyclase no 0.39
    19 DZA65_RS08925 molybdopterin-synthase adenylyltransferase MoeB 0.68 0.39
    20 DZA65_RS11980 type II toxin-antitoxin system RelE/ParE family toxin no 0.39

    Or look for negative cofitness