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  • Top cofit genes for DZA65_RS11060 from Dickeya dianthicola ME23

    rhamnogalacturonate lyase
    SEED: rhamnogalacturonate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04300 LuxR family transcriptional regulator no 0.67
    2 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.63
    3 DZA65_RS04305 cytosine permease no 0.63
    4 DZA65_RS09740 alpha/beta hydrolase no 0.62
    5 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.61
    6 DZA65_RS12515 GAF domain-containing protein no 0.59
    7 DZA65_RS07350 tannase/feruloyl esterase family alpha/beta hydrolase no 0.59
    8 DZA65_RS13830 flagella biosynthesis regulatory protein FliZ no 0.58
    9 DZA65_RS13440 porin no 0.58
    10 DZA65_RS11105 SgcJ/EcaC family oxidoreductase no 0.57
    11 DZA65_RS17030 hypothetical protein no 0.56
    12 DZA65_RS06195 hypothetical protein no 0.54
    13 DZA65_RS16960 tRNA-Ala no 0.54
    14 DZA65_RS19030 nucleoside-specific channel-forming protein Tsx no 0.53
    15 DZA65_RS04780 hypothetical protein no 0.53
    16 DZA65_RS13545 arylamine N-acetyltransferase no 0.53
    17 DZA65_RS04815 hypothetical protein no 0.53
    18 DZA65_RS09855 DUF2867 domain-containing protein no 0.53
    19 DZA65_RS17325 polyphenol oxidase 0.53 0.53
    20 DZA65_RS07225 proline iminopeptidase-family hydrolase no 0.52

    Or look for negative cofitness