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  • Top cofit genes for DZA65_RS10995 from Dickeya dianthicola ME23

    protease SohB
    SEED: Possible protease sohB (EC 3.4.21.-)
    KEGG: serine protease SohB

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS05990 muropeptide MFS transporter AmpG 0.53 0.51
    2 DZA65_RS22925 hypothetical protein no 0.48
    3 DZA65_RS18960 chemotaxis protein no 0.46
    4 DZA65_RS08005 hypothetical protein no 0.46
    5 DZA65_RS05955 SnoaL-like domain-containing protein no 0.46
    6 DZA65_RS05835 proline-specific permease ProY 0.23 0.44
    7 DZA65_RS22650 4-hydroxyphenylpyruvate dioxygenase 0.46 0.44
    8 DZA65_RS07170 UTP--glucose-1-phosphate uridylyltransferase 0.53 0.44
    9 DZA65_RS09875 cold shock-like protein CspD no 0.43
    10 DZA65_RS01285 amino acid ABC transporter ATP-binding protein 0.35 0.43
    11 DZA65_RS06485 esterase no 0.42
    12 DZA65_RS16355 hypothetical protein no 0.42
    13 DZA65_RS10255 helix-turn-helix transcriptional regulator no 0.42
    14 DZA65_RS11750 oligogalacturonate-specific porin KdgM no 0.42
    15 DZA65_RS09840 arginine ABC transporter substrate-binding protein no 0.41
    16 DZA65_RS13240 LysR family transcriptional regulator no 0.41
    17 DZA65_RS09865 hydroxylamine reductase 0.23 0.41
    18 DZA65_RS16335 DNA cytosine methyltransferase no 0.41
    19 DZA65_RS07175 glycosyltransferase no 0.41
    20 DZA65_RS09830 arginine ABC transporter permease ArtM 0.29 0.41

    Or look for negative cofitness