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  • Top cofit genes for DZA65_RS10735 from Dickeya dianthicola ME23

    MipA/OmpV family protein
    SEED: MltA-interacting protein MipA
    KEGG: outer membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS01170 DUF1176 domain-containing protein no 0.51
    2 DZA65_RS14135 glycoside hydrolase family protein no 0.51
    3 DZA65_RS18635 cytochrome P450 no 0.48
    4 DZA65_RS10710 YebY family protein 0.68 0.48
    5 DZA65_RS16745 iron ABC transporter permease no 0.47
    6 DZA65_RS08795 MBL fold metallo-hydrolase no 0.45
    7 DZA65_RS03835 VOC family protein no 0.44
    8 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM no 0.44
    9 DZA65_RS09380 hypothetical protein no 0.43
    10 DZA65_RS06215 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.22 0.43
    11 DZA65_RS04285 RpoE-regulated lipoprotein no 0.42
    12 DZA65_RS10990 YciK family oxidoreductase 0.27 0.42
    13 DZA65_RS12590 phage baseplate assembly protein V no 0.40
    14 DZA65_RS18715 type I-F CRISPR-associated endonuclease Cas1 no 0.40
    15 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase no 0.40
    16 DZA65_RS21280 glycoside hydrolase family 28 protein no 0.40
    17 DZA65_RS09390 hypothetical protein no 0.39
    18 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase no 0.38
    19 DZA65_RS12830 HAMP domain-containing protein no 0.38
    20 DZA65_RS04335 HAMP domain-containing protein no 0.38

    Or look for negative cofitness