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  • Top cofit genes for DZA65_RS10325 from Dickeya dianthicola ME23

    lipoprotein
    SEED: Putative lipoprotein yceB precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00560 hypothetical protein no 0.47
    2 DZA65_RS11590 septum site-determining protein MinD no 0.46
    3 DZA65_RS12940 envelope stress response membrane protein PspB no 0.44
    4 DZA65_RS08775 flavin reductase family protein 0.47 0.43
    5 DZA65_RS03690 DUF485 domain-containing protein no 0.43
    6 DZA65_RS18780 phage tail protein no 0.42
    7 DZA65_RS05225 ornithine decarboxylase no 0.42
    8 DZA65_RS02710 outer membrane beta-barrel protein no 0.42
    9 DZA65_RS13605 purine nucleoside phosphoramidase no 0.41
    10 DZA65_RS21700 LysR family transcriptional regulator no 0.40
    11 DZA65_RS08320 ABC transporter substrate-binding protein no 0.40
    12 DZA65_RS05610 YbhB/YbcL family Raf kinase inhibitor-like protein 0.27 0.40
    13 DZA65_RS18750 hypothetical protein no 0.40
    14 DZA65_RS01670 DnaA initiator-associating protein DiaA 0.48 0.40
    15 DZA65_RS03365 SAM-dependent DNA methyltransferase no 0.40
    16 DZA65_RS04440 DNA oxidative demethylase AlkB 0.55 0.40
    17 DZA65_RS02505 peptide chain release factor 3 no 0.40
    18 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF no 0.39
    19 DZA65_RS07770 dicarboxylate/amino acid:cation symporter no 0.38
    20 DZA65_RS09460 YejL family protein 0.22 0.38

    Or look for negative cofitness