• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for DZA65_RS09875 from Dickeya dianthicola ME23

    cold shock-like protein CspD
    SEED: Cold shock protein CspD
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS16530 YlcG family protein no 0.57
    2 DZA65_RS19780 amino acid ABC transporter permease no 0.51
    3 DZA65_RS17520 HTH-type transcriptional regulator EutR no 0.51
    4 DZA65_RS00690 ABC transporter permease subunit 0.46 0.50
    5 DZA65_RS16215 sugar phosphate isomerase/epimerase no 0.49
    6 DZA65_RS15135 hypothetical protein no 0.47
    7 DZA65_RS07575 hypothetical protein no 0.46
    8 DZA65_RS08165 hydrolase no 0.46
    9 DZA65_RS02405 hypothetical protein no 0.46
    10 DZA65_RS09840 arginine ABC transporter substrate-binding protein no 0.46
    11 DZA65_RS02355 1-aminocyclopropane-1-carboxylate deaminase no 0.45
    12 DZA65_RS08145 type II toxin-antitoxin system HicA family toxin no 0.44
    13 DZA65_RS11040 electron transport complex subunit RsxD 0.33 0.44
    14 DZA65_RS07650 AIPR family protein no 0.44
    15 DZA65_RS14445 hypothetical protein no 0.44
    16 DZA65_RS21900 ABC transporter ATP-binding protein no 0.43
    17 DZA65_RS10995 protease SohB no 0.43
    18 DZA65_RS05430 flavodoxin 0.50 0.43
    19 DZA65_RS15630 prepilin peptidase no 0.42
    20 DZA65_RS04430 multidrug/biocide efflux PACE transporter no 0.42

    Or look for negative cofitness