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  • Top cofit genes for DZA65_RS09795 from Dickeya dianthicola ME23

    putrescine ABC transporter ATP-binding subunit PotG
    SEED: Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2)
    KEGG: putrescine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS02765 ATPase AAA no 0.49
    2 DZA65_RS02700 L-talarate/galactarate dehydratase no 0.49
    3 DZA65_RS16685 aminopeptidase PepB no 0.46
    4 DZA65_RS07610 type IV secretion system protein no 0.45
    5 DZA65_RS00395 VfmB protein no 0.45
    6 DZA65_RS17845 oxalurate catabolism protein HpxZ no 0.43
    7 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor 0.67 0.43
    8 DZA65_RS10460 VOC family protein 0.24 0.42
    9 DZA65_RS09855 DUF2867 domain-containing protein 0.40 0.40
    10 DZA65_RS08295 Tat pathway signal sequence domain protein no 0.40
    11 DZA65_RS03650 phosphodiesterase 0.30 0.40
    12 DZA65_RS18755 hypothetical protein no 0.39
    13 DZA65_RS19920 nif-specific transcriptional activator NifA 0.17 0.39
    14 DZA65_RS22245 serine/threonine protein kinase 0.16 0.39
    15 DZA65_RS11600 ribonuclease D 0.56 0.39
    16 DZA65_RS13585 beta-N-acetylhexosaminidase 0.80 0.39
    17 DZA65_RS02920 hypothetical protein no 0.39
    18 DZA65_RS20135 proline/glycine betaine ABC transporter permease no 0.38
    19 DZA65_RS02145 type II toxin-antitoxin system RelE/ParE family toxin no 0.38
    20 DZA65_RS04225 RnfH family protein no 0.38

    Or look for negative cofitness