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  • Top cofit genes for DZA65_RS09780 from Dickeya dianthicola ME23

    30S ribosomal protein S6--L-glutamate ligase
    SEED: Ribosomal protein S6 glutaminyl transferase
    KEGG: ribosomal protein S6 modification protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS01445 HTH-type transcriptional activator AaeR 0.28 0.43
    2 DZA65_RS10090 2-hydroxycarboxylate transporter family protein no 0.38
    3 DZA65_RS15110 phage virion morphogenesis protein no 0.37
    4 DZA65_RS02810 transcriptional regulator no 0.37
    5 DZA65_RS04505 sugar ABC transporter permease 0.32 0.37
    6 DZA65_RS02405 hypothetical protein no 0.37
    7 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I 0.47 0.37
    8 DZA65_RS02570 alkyl hydroperoxide reductase subunit F no 0.36
    9 DZA65_RS18120 glycosyl hydrolase family 88 no 0.36
    10 DZA65_RS18515 GNAT family N-acetyltransferase no 0.36
    11 DZA65_RS05755 alpha/beta fold hydrolase no 0.34
    12 DZA65_RS11325 LysR family transcriptional regulator 0.21 0.34
    13 DZA65_RS19070 DNA gyrase inhibitor YacG no 0.34
    14 DZA65_RS00440 hypothetical protein no 0.34
    15 DZA65_RS18495 PTS transporter subunit EIIC no 0.34
    16 DZA65_RS04045 Dam family site-specific DNA-(adenine-N6)-methyltransferase no 0.34
    17 DZA65_RS08540 type VI secretion system contractile sheath small subunit no 0.33
    18 DZA65_RS15290 NUDIX hydrolase YfcD 0.58 0.33
    19 DZA65_RS11895 peptidase T 0.37 0.33
    20 DZA65_RS20770 DNA uptake porin HofQ 0.45 0.33

    Or look for negative cofitness