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  • Top cofit genes for DZA65_RS09735 from Dickeya dianthicola ME23

    ABC transporter permease
    SEED: Methionine ABC transporter permease protein
    KEGG: D-methionine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS18105 6-carboxytetrahydropterin synthase QueD no 0.55
    2 DZA65_RS02140 RNA-directed DNA polymerase no 0.55
    3 DZA65_RS04490 ribonuclease Z no 0.52
    4 DZA65_RS15805 pectate lyase no 0.51
    5 DZA65_RS08680 CidA/LrgA family protein no 0.50
    6 DZA65_RS07060 uridine kinase no 0.50
    7 DZA65_RS20810 GMP/IMP nucleotidase no 0.50
    8 DZA65_RS16405 hypothetical protein no 0.49
    9 DZA65_RS00615 serine hydrolase no 0.48
    10 DZA65_RS06325 nicotinamide mononucleotide deamidase-related protein YfaY no 0.47
    11 DZA65_RS19490 tRNA/rRNA methyltransferase no 0.46
    12 DZA65_RS03015 transcriptional regulator UhpA no 0.46
    13 DZA65_RS15535 avirulence protein no 0.46
    14 DZA65_RS20785 PilN domain-containing protein no 0.46
    15 DZA65_RS16495 hypothetical protein no 0.46
    16 DZA65_RS02710 outer membrane beta-barrel protein 0.63 0.46
    17 DZA65_RS09850 N-acetylmuramoyl-L-alanine amidase no 0.45
    18 DZA65_RS05825 cobalamin-independent methionine synthase II family protein 0.39 0.45
    19 DZA65_RS10785 DNA topoisomerase III no 0.45
    20 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ no 0.45

    Or look for negative cofitness