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  • Top cofit genes for DZA65_RS09730 from Dickeya dianthicola ME23

    methionine ABC transporter ATP-binding protein
    SEED: Methionine ABC transporter ATP-binding protein
    KEGG: D-methionine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS19315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no 0.45
    2 DZA65_RS03395 LysR family transcriptional regulator no 0.40
    3 DZA65_RS03365 SAM-dependent DNA methyltransferase no 0.40
    4 DZA65_RS02210 amino acid transporter no 0.39
    5 DZA65_RS01760 cell division protein FtsP no 0.37
    6 DZA65_RS03730 ABC transporter permease no 0.37
    7 DZA65_RS12235 YscQ/HrcQ family type III secretion apparatus protein no 0.36
    8 DZA65_RS15455 TSUP family transporter no 0.36
    9 DZA65_RS12710 serine/threonine protein phosphatase no 0.35
    10 DZA65_RS04670 alkene reductase no 0.34
    11 DZA65_RS08370 LysR family transcriptional regulator no 0.34
    12 DZA65_RS16815 two-component system response regulator GlrR no 0.34
    13 DZA65_RS20250 methionine synthase no 0.33
    14 DZA65_RS10640 ATP-binding protein no 0.33
    15 DZA65_RS19160 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no 0.33
    16 DZA65_RS01830 rhamnulose-1-phosphate aldolase no 0.32
    17 DZA65_RS07845 hydrogenase 4 subunit D no 0.32
    18 DZA65_RS00385 3-oxoacyl-ACP synthase no 0.32
    19 DZA65_RS14740 uroporphyrinogen-III C-methyltransferase 0.46 0.32
    20 DZA65_RS19290 hypothetical protein no 0.32

    Or look for negative cofitness