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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS09490 from
Dickeya dianthicola ME23
DEAD/DEAH box helicase
SEED: ATP-dependent RNA helicase YejH
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS16665
bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
no
0.53
2
DZA65
_RS04285
RpoE-regulated lipoprotein
no
0.53
3
DZA65
_RS05145
hypothetical protein
no
0.52
4
DZA65
_RS04775
hypothetical protein
no
0.50
5
DZA65
_RS19790
biotin attachment protein
no
0.49
6
DZA65
_RS12025
EndoU domain-containing protein
no
0.49
7
DZA65
_RS11870
high frequency lysogenization protein HflD
0.48
0.48
8
DZA65
_RS16370
hypothetical protein
no
0.48
9
DZA65
_RS08115
iron-siderophore ABC transporter substrate-binding protein
no
0.48
10
DZA65
_RS20660
aminodeoxychorismate synthase component II
no
0.47
11
DZA65
_RS00545
helix-turn-helix transcriptional regulator
0.35
0.47
12
DZA65
_RS13965
flagellar hook-associated protein FlgK
no
0.46
13
DZA65
_RS11745
carbohydrate ABC transporter substrate-binding protein
no
0.46
14
DZA65
_RS04105
phage tail protein
no
0.46
15
DZA65
_RS18885
glucosamine kinase
no
0.46
16
DZA65
_RS07840
hydrogenase 4 membrane subunit
no
0.45
17
DZA65
_RS06840
succinate dehydrogenase iron-sulfur subunit
no
0.45
18
DZA65
_RS09770
glutaredoxin, GrxA family
no
0.45
19
DZA65
_RS12730
ABC transporter permease subunit
no
0.44
20
DZA65
_RS18435
YggS family pyridoxal phosphate-dependent enzyme
0.24
0.44
Or look for
negative cofitness