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  • Top cofit genes for DZA65_RS09490 from Dickeya dianthicola ME23

    DEAD/DEAH box helicase
    SEED: ATP-dependent RNA helicase YejH

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN no 0.53
    2 DZA65_RS04285 RpoE-regulated lipoprotein no 0.53
    3 DZA65_RS05145 hypothetical protein no 0.52
    4 DZA65_RS04775 hypothetical protein no 0.50
    5 DZA65_RS19790 biotin attachment protein no 0.49
    6 DZA65_RS12025 EndoU domain-containing protein no 0.49
    7 DZA65_RS11870 high frequency lysogenization protein HflD 0.48 0.48
    8 DZA65_RS16370 hypothetical protein no 0.48
    9 DZA65_RS08115 iron-siderophore ABC transporter substrate-binding protein no 0.48
    10 DZA65_RS20660 aminodeoxychorismate synthase component II no 0.47
    11 DZA65_RS00545 helix-turn-helix transcriptional regulator 0.35 0.47
    12 DZA65_RS13965 flagellar hook-associated protein FlgK no 0.46
    13 DZA65_RS11745 carbohydrate ABC transporter substrate-binding protein no 0.46
    14 DZA65_RS04105 phage tail protein no 0.46
    15 DZA65_RS18885 glucosamine kinase no 0.46
    16 DZA65_RS07840 hydrogenase 4 membrane subunit no 0.45
    17 DZA65_RS06840 succinate dehydrogenase iron-sulfur subunit no 0.45
    18 DZA65_RS09770 glutaredoxin, GrxA family no 0.45
    19 DZA65_RS12730 ABC transporter permease subunit no 0.44
    20 DZA65_RS18435 YggS family pyridoxal phosphate-dependent enzyme 0.24 0.44

    Or look for negative cofitness