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Cofit
Top cofit genes for DZA65_RS09370 from
Dickeya dianthicola ME23
short-chain dehydrogenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS14535
LysR family transcriptional regulator
no
0.47
2
DZA65
_RS13255
6-phospho-beta-glucosidase
no
0.43
3
DZA65
_RS10820
patatin-like phospholipase RssA
no
0.42
4
DZA65
_RS02550
ABC transporter ATP-binding protein
no
0.42
5
DZA65
_RS07440
IS5 family transposase
no
0.42
6
DZA65
_RS20350
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
no
0.42
7
DZA65
_RS04980
integrating conjugative element protein
no
0.40
8
DZA65
_RS11440
MFS transporter
no
0.39
9
DZA65
_RS07660
DUF2857 domain-containing protein
no
0.37
10
DZA65
_RS04985
hypothetical protein
no
0.37
11
DZA65
_RS22045
sugar ABC transporter permease
no
0.37
12
DZA65
_RS17050
family 78 glycoside hydrolase catalytic domain
no
0.37
13
DZA65
_RS14585
protein disulfide-isomerase
no
0.37
14
DZA65
_RS13415
aliphatic sulfonates ABC transporter ATP-binding protein
no
0.37
15
DZA65
_RS05640
hypothetical protein
no
0.36
16
DZA65
_RS16330
restriction endonuclease
no
0.36
17
DZA65
_RS02805
helix-turn-helix transcriptional regulator
no
0.36
18
DZA65
_RS13025
stress response translation initiation inhibitor YciH
no
0.35
19
DZA65
_RS14335
transcriptional regulator
no
0.35
20
DZA65
_RS07360
glutathione S-transferase family protein
no
0.35
Or look for
negative cofitness