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  • Top cofit genes for DZA65_RS09355 from Dickeya dianthicola ME23

    SDR family NAD(P)-dependent oxidoreductase
    SEED: Short-chain dehydrogenase/reductase SDR

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS12820 PAS domain-containing protein no 0.60
    2 DZA65_RS10270 ribonuclease T2 0.16 0.56
    3 DZA65_RS14780 multidrug efflux RND transporter permease subunit no 0.53
    4 DZA65_RS06005 trigger factor no 0.53
    5 DZA65_RS04295 transcriptional regulator no 0.51
    6 DZA65_RS04215 SsrA-binding protein SmpB no 0.49
    7 DZA65_RS08485 TetR/AcrR family transcriptional regulator no 0.48
    8 DZA65_RS14785 efflux RND transporter periplasmic adaptor subunit no 0.48
    9 DZA65_RS16760 nickel/cobalt transporter no 0.48
    10 DZA65_RS13530 transcription-repair coupling factor no 0.46
    11 DZA65_RS20755 SPOR domain-containing protein no 0.46
    12 DZA65_RS14010 flagellar basal body rod protein FlgB 0.21 0.44
    13 DZA65_RS08990 excinuclease ABC subunit B no 0.44
    14 DZA65_RS14015 flagellar basal body P-ring formation protein FlgA no 0.44
    15 DZA65_RS19620 deoxyribonuclease I no 0.43
    16 DZA65_RS01680 penicillin-binding protein activator no 0.43
    17 DZA65_RS13970 flagellar assembly peptidoglycan hydrolase FlgJ no 0.43
    18 DZA65_RS06100 Hha toxicity modulator TomB no 0.42
    19 DZA65_RS03330 EamA family transporter no 0.42
    20 DZA65_RS08090 DHA2 family efflux MFS transporter permease subunit no 0.42

    Or look for negative cofitness