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  • Top cofit genes for DZA65_RS09285 from Dickeya dianthicola ME23

    TolC family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17585 ABC transporter ATP-binding protein no 0.47
    2 DZA65_RS19395 ribonucleoside hydrolase RihC no 0.46
    3 DZA65_RS00985 3'-5' ssDNA/RNA exonuclease TatD no 0.44
    4 DZA65_RS13575 NAD(P)/FAD-dependent oxidoreductase no 0.44
    5 DZA65_RS19050 protein transport protein HofC no 0.42
    6 DZA65_RS20845 transcription elongation factor GreB no 0.41
    7 DZA65_RS17485 ankyrin repeat domain-containing protein no 0.41
    8 DZA65_RS07505 Trm112 family protein no 0.40
    9 DZA65_RS06070 ammonium transporter AmtB no 0.40
    10 DZA65_RS00320 xylose ABC transporter ATP-binding protein no 0.40
    11 DZA65_RS17830 gamma-glutamyltransferase family protein no 0.38
    12 DZA65_RS13555 glycoside hydrolase family 31 protein no 0.38
    13 DZA65_RS08945 CidB/LrgB family autolysis modulator no 0.38
    14 DZA65_RS05710 SpoIIE family protein phosphatase no 0.38
    15 DZA65_RS09085 helix-turn-helix transcriptional regulator no 0.37
    16 DZA65_RS17765 S-methyl-5-thioribose-1-phosphate isomerase no 0.37
    17 DZA65_RS19925 nitrogen fixation negative regulator NifL no 0.37
    18 DZA65_RS12680 late control D family protein no 0.37
    19 DZA65_RS07250 ABC transporter ATP-binding protein no 0.37
    20 DZA65_RS12870 murein tripeptide amidase MpaA no 0.37

    Or look for negative cofitness