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  • Top cofit genes for DZA65_RS09280 from Dickeya dianthicola ME23

    ABC transporter permease
    SEED: Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04810 hypothetical protein no 0.45
    2 DZA65_RS01820 helix-turn-helix domain-containing protein no 0.45
    3 DZA65_RS02210 amino acid transporter no 0.43
    4 DZA65_RS03685 cation/acetate symporter ActP no 0.42
    5 DZA65_RS15325 transporter substrate-binding domain-containing protein no 0.41
    6 DZA65_RS10760 DUF1315 family protein no 0.41
    7 DZA65_RS08200 MFS transporter no 0.41
    8 DZA65_RS04465 4Fe-4S dicluster domain-containing protein no 0.40
    9 DZA65_RS17235 class 1b ribonucleoside-diphosphate reductase subunit alpha no 0.40
    10 DZA65_RS08370 LysR family transcriptional regulator no 0.40
    11 DZA65_RS05815 phosphate regulon sensor histidine kinase PhoR no 0.39
    12 DZA65_RS18965 YacL family protein no 0.39
    13 DZA65_RS06725 methyl-accepting chemotaxis protein no 0.37
    14 DZA65_RS07640 lytic transglycosylase domain-containing protein no 0.37
    15 DZA65_RS19955 nitrogen fixation protein NifW no 0.37
    16 DZA65_RS09625 hypothetical protein no 0.36
    17 DZA65_RS15665 type II secretion system major pseudopilin GspG no 0.36
    18 DZA65_RS02030 YfcC family protein no 0.36
    19 DZA65_RS16120 DNA helicase IV no 0.36
    20 DZA65_RS19315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no 0.35

    Or look for negative cofitness