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  • Top cofit genes for DZA65_RS09190 from Dickeya dianthicola ME23

    glutamine ABC transporter ATP-binding protein GlnQ
    SEED: Glutamate transport ATP-binding protein
    KEGG: glutamine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21490 DNA-binding transcriptional regulator CytR 0.86 0.41
    2 DZA65_RS01585 serine endoprotease DegQ no 0.39
    3 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) no 0.38
    4 DZA65_RS10120 citrate lyase holo-[acyl-carrier protein] synthase no 0.37
    5 DZA65_RS18650 alanine racemase 0.16 0.37
    6 DZA65_RS08600 type VI secretion system protein TssA no 0.37
    7 DZA65_RS04215 SsrA-binding protein SmpB no 0.37
    8 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC no 0.37
    9 DZA65_RS00460 3-oxoacyl-ACP synthase no 0.36
    10 DZA65_RS09355 SDR family NAD(P)-dependent oxidoreductase no 0.36
    11 DZA65_RS04455 MFS transporter no 0.35
    12 DZA65_RS01890 ABC transporter substrate-binding protein no 0.35
    13 DZA65_RS16015 IS200/IS605 family transposase no 0.34
    14 DZA65_RS02940 DedA family protein 0.21 0.34
    15 DZA65_RS18460 radical SAM family heme chaperone HemW 0.48 0.34
    16 DZA65_RS19735 ABC transporter permease no 0.33
    17 DZA65_RS03720 ABC transporter substrate-binding protein 0.46 0.33
    18 DZA65_RS06030 peptidylprolyl isomerase 0.22 0.33
    19 DZA65_RS13435 porin no 0.33
    20 DZA65_RS11120 mannose-6-phosphate isomerase no 0.33

    Or look for negative cofitness