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  • Top cofit genes for DZA65_RS09165 from Dickeya dianthicola ME23

    peptidase M3
    SEED: probable peptidase VC1983

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS02980 altronate dehydratase no 0.54
    2 DZA65_RS16715 Fe-S cluster assembly scaffold IscU no 0.52
    3 DZA65_RS02975 tagaturonate reductase no 0.50
    4 DZA65_RS01205 HesA/MoeB/ThiF family protein no 0.49
    5 DZA65_RS07460 SDR family oxidoreductase no 0.49
    6 DZA65_RS02965 glucuronate isomerase no 0.48
    7 DZA65_RS10935 porin no 0.47
    8 DZA65_RS16235 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase no 0.45
    9 DZA65_RS16710 iron-sulfur cluster assembly protein IscA 0.42 0.45
    10 DZA65_RS01210 thiamine phosphate synthase no 0.44
    11 DZA65_RS11735 carbohydrate ABC transporter permease no 0.44
    12 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC no 0.43
    13 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase no 0.42
    14 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase no 0.42
    15 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS no 0.42
    16 DZA65_RS01190 2-iminoacetate synthase ThiH no 0.42
    17 DZA65_RS11835 oligogalacturonate lyase no 0.42
    18 DZA65_RS21865 cellulose biosynthesis protein BcsC no 0.41
    19 DZA65_RS11730 sugar ABC transporter permease no 0.40
    20 DZA65_RS16685 aminopeptidase PepB no 0.40

    Or look for negative cofitness