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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS09165 from
Dickeya dianthicola ME23
peptidase M3
SEED: probable peptidase VC1983
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS02980
altronate dehydratase
no
0.54
2
DZA65
_RS16715
Fe-S cluster assembly scaffold IscU
no
0.52
3
DZA65
_RS02975
tagaturonate reductase
no
0.50
4
DZA65
_RS01205
HesA/MoeB/ThiF family protein
no
0.49
5
DZA65
_RS07460
SDR family oxidoreductase
no
0.49
6
DZA65
_RS02965
glucuronate isomerase
no
0.48
7
DZA65
_RS10935
porin
no
0.47
8
DZA65
_RS16235
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
no
0.45
9
DZA65
_RS16710
iron-sulfur cluster assembly protein IscA
0.42
0.45
10
DZA65
_RS01210
thiamine phosphate synthase
no
0.44
11
DZA65
_RS11735
carbohydrate ABC transporter permease
no
0.44
12
DZA65
_RS01215
phosphomethylpyrimidine synthase ThiC
no
0.43
13
DZA65
_RS08960
adenosylmethionine--8-amino-7-oxononanoate transaminase
no
0.42
14
DZA65
_RS18165
2-hydroxy-3-oxopropionate reductase
no
0.42
15
DZA65
_RS09880
ATP-dependent Clp protease adapter ClpS
no
0.42
16
DZA65
_RS01190
2-iminoacetate synthase ThiH
no
0.42
17
DZA65
_RS11835
oligogalacturonate lyase
no
0.42
18
DZA65
_RS21865
cellulose biosynthesis protein BcsC
no
0.41
19
DZA65
_RS11730
sugar ABC transporter permease
no
0.40
20
DZA65
_RS16685
aminopeptidase PepB
no
0.40
Or look for
negative cofitness