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  • Top cofit genes for DZA65_RS09025 from Dickeya dianthicola ME23

    iron ABC transporter substrate-binding protein
    SEED: Ferric iron ABC transporter, iron-binding protein
    KEGG: iron(III) transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17390 inner membrane protein YpjD 0.75 0.81
    2 DZA65_RS09030 iron ABC transporter permease 0.87 0.77
    3 DZA65_RS15585 TonB-dependent siderophore receptor no 0.73
    4 DZA65_RS20915 glycogen synthase GlgA 0.30 0.73
    5 DZA65_RS06220 hypothetical protein 0.61 0.70
    6 DZA65_RS01630 FAD-dependent oxidoreductase 0.83 0.69
    7 DZA65_RS01635 glutamate synthase large subunit 0.75 0.69
    8 DZA65_RS20275 homoserine O-succinyltransferase no 0.68
    9 DZA65_RS15545 enterobactin transporter EntS 0.62 0.66
    10 DZA65_RS13640 aminodeoxychorismate lyase 0.75 0.66
    11 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.79 0.65
    12 DZA65_RS10055 histidinol dehydrogenase 0.38 0.65
    13 DZA65_RS19270 acetolactate synthase large subunit 0.74 0.65
    14 DZA65_RS21470 cystathionine gamma-synthase 0.31 0.65
    15 DZA65_RS01580 outer membrane-stress sensor serine endopeptidase DegS no 0.65
    16 DZA65_RS21310 ketol-acid reductoisomerase 0.71 0.65
    17 DZA65_RS17160 pantoate--beta-alanine ligase no 0.64
    18 DZA65_RS00935 N-acetyl-gamma-glutamyl-phosphate reductase 0.76 0.64
    19 DZA65_RS15580 enterochelin esterase no 0.64
    20 DZA65_RS00870 HTH-type transcriptional regulator MetR 0.49 0.64

    Or look for negative cofitness