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  • Top cofit genes for DZA65_RS08935 from Dickeya dianthicola ME23

    NAD-dependent malic enzyme
    SEED: NAD-dependent malic enzyme (EC 1.1.1.38)
    KEGG: malate dehydrogenase (oxaloacetate-decarboxylating)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS13530 transcription-repair coupling factor 0.43 0.80
    2 DZA65_RS00055 glutathione-disulfide reductase 0.73 0.78
    3 DZA65_RS13860 DegT/DnrJ/EryC1/StrS family aminotransferase no 0.76
    4 DZA65_RS08120 iron ABC transporter permease no 0.76
    5 DZA65_RS05240 oxidative damage protection protein 0.41 0.76
    6 DZA65_RS11655 TerC family protein 0.26 0.76
    7 DZA65_RS08130 ABC transporter ATP-binding protein no 0.75
    8 DZA65_RS13800 RpiB/LacA/LacB family sugar-phosphate isomerase 0.49 0.75
    9 DZA65_RS13330 AI-2E family transporter YdiK 0.36 0.75
    10 DZA65_RS12195 PAS domain-containing protein no 0.74
    11 DZA65_RS16945 ATP-dependent RNA helicase SrmB 0.66 0.74
    12 DZA65_RS13850 Gfo/Idh/MocA family oxidoreductase no 0.73
    13 DZA65_RS19225 siderophore-interacting protein 0.59 0.73
    14 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase 0.48 0.72
    15 DZA65_RS14005 flagellar basal body rod protein FlgC 0.89 0.72
    16 DZA65_RS13870 flagellin no 0.72
    17 DZA65_RS19735 ABC transporter permease no 0.72
    18 DZA65_RS13865 methyltransferase no 0.72
    19 DZA65_RS00980 Sec-independent protein translocase subunit TatC 0.42 0.72
    20 DZA65_RS03180 transcription elongation factor GreA 0.47 0.71

    Or look for negative cofitness