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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS08835 from
Dickeya dianthicola ME23
type VI secretion system PAAR protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS12950
phage shock protein operon transcriptional activator
no
0.54
2
DZA65
_RS16365
hypothetical protein
no
0.49
3
DZA65
_RS14630
LysR family transcriptional regulator
no
0.47
4
DZA65
_RS07330
DUF3320 domain-containing protein
no
0.47
5
DZA65
_RS16960
tRNA-Ala
no
0.45
6
DZA65
_RS16995
HD domain-containing protein
no
0.43
7
DZA65
_RS07605
P-type conjugative transfer protein VirB9
no
0.43
8
DZA65
_RS14620
DUF4158 domain-containing protein
no
0.43
9
DZA65
_RS08740
DUF2501 domain-containing protein
no
0.43
10
DZA65
_RS18145
GTP diphosphokinase
no
0.43
11
DZA65
_RS22290
substrate-binding domain-containing protein
no
0.43
12
DZA65
_RS19280
DedA family protein
no
0.42
13
DZA65
_RS16115
methylglyoxal synthase
no
0.42
14
DZA65
_RS17550
two-component system response regulator BtsR
no
0.42
15
DZA65
_RS18695
type I-F CRISPR-associated protein Csy3
no
0.42
16
DZA65
_RS00035
oligopeptidase A
no
0.41
17
DZA65
_RS05675
HAD family hydrolase
no
0.41
18
DZA65
_RS17740
murein L,D-transpeptidase
no
0.41
19
DZA65
_RS13545
arylamine N-acetyltransferase
no
0.40
20
DZA65
_RS03165
DMT family transporter
no
0.40
Or look for
negative cofitness