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  • Top cofit genes for DZA65_RS08835 from Dickeya dianthicola ME23

    type VI secretion system PAAR protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS12950 phage shock protein operon transcriptional activator no 0.54
    2 DZA65_RS16365 hypothetical protein no 0.49
    3 DZA65_RS14630 LysR family transcriptional regulator no 0.47
    4 DZA65_RS07330 DUF3320 domain-containing protein no 0.47
    5 DZA65_RS16960 tRNA-Ala no 0.45
    6 DZA65_RS16995 HD domain-containing protein no 0.43
    7 DZA65_RS07605 P-type conjugative transfer protein VirB9 no 0.43
    8 DZA65_RS14620 DUF4158 domain-containing protein no 0.43
    9 DZA65_RS08740 DUF2501 domain-containing protein no 0.43
    10 DZA65_RS18145 GTP diphosphokinase no 0.43
    11 DZA65_RS22290 substrate-binding domain-containing protein no 0.43
    12 DZA65_RS19280 DedA family protein no 0.42
    13 DZA65_RS16115 methylglyoxal synthase no 0.42
    14 DZA65_RS17550 two-component system response regulator BtsR no 0.42
    15 DZA65_RS18695 type I-F CRISPR-associated protein Csy3 no 0.42
    16 DZA65_RS00035 oligopeptidase A no 0.41
    17 DZA65_RS05675 HAD family hydrolase no 0.41
    18 DZA65_RS17740 murein L,D-transpeptidase no 0.41
    19 DZA65_RS13545 arylamine N-acetyltransferase no 0.40
    20 DZA65_RS03165 DMT family transporter no 0.40

    Or look for negative cofitness