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  • Top cofit genes for DZA65_RS08630 from Dickeya dianthicola ME23

    iron permease
    SEED: Ferrous iron transport permease EfeU
    KEGG: high-affinity iron transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.51 0.45
    2 DZA65_RS12110 Harpin hrpN no 0.41
    3 DZA65_RS12345 SDR family oxidoreductase no 0.38
    4 DZA65_RS17255 ribonuclease HI no 0.37
    5 DZA65_RS20260 bifunctional isocitrate dehydrogenase kinase/phosphatase 0.38 0.36
    6 DZA65_RS12615 esterase-like activity of phytase family protein no 0.34
    7 DZA65_RS12585 phage tail protein no 0.34
    8 DZA65_RS02990 TerC family protein 0.53 0.34
    9 DZA65_RS12350 ABC transporter ATP-binding protein no 0.34
    10 DZA65_RS09570 1-phosphofructokinase 0.37 0.34
    11 DZA65_RS09155 ATP-dependent DNA helicase DinG 0.44 0.33
    12 DZA65_RS01350 DNA-binding transcriptional regulator Fis no 0.33
    13 DZA65_RS08225 winged helix-turn-helix transcriptional regulator no 0.33
    14 DZA65_RS21605 stress resistance protein no 0.33
    15 DZA65_RS12590 phage baseplate assembly protein V no 0.33
    16 DZA65_RS17025 alpha/beta hydrolase 0.44 0.33
    17 DZA65_RS11340 hypothetical protein no 0.33
    18 DZA65_RS06285 MFS transporter no 0.33
    19 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase 0.68 0.32
    20 DZA65_RS05615 aspartyl/asparaginyl beta-hydroxylase domain-containing protein no 0.32

    Or look for negative cofitness