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  • Top cofit genes for DZA65_RS08575 from Dickeya dianthicola ME23

    type VI secretion system baseplate subunit TssK
    SEED: Uncharacterized protein ImpJ/VasE
    KEGG: type VI secretion system protein ImpJ

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS12620 aromatic acid/H+ symport family MFS transporter 0.24 0.44
    2 DZA65_RS07605 P-type conjugative transfer protein VirB9 no 0.42
    3 DZA65_RS13590 phosphotransferase no 0.42
    4 DZA65_RS00565 hypothetical protein no 0.41
    5 DZA65_RS22940 hypothetical protein no 0.40
    6 DZA65_RS05955 SnoaL-like domain-containing protein no 0.39
    7 DZA65_RS14835 N-acetyltransferase no 0.39
    8 DZA65_RS17495 sugar ABC transporter ATP-binding protein no 0.39
    9 DZA65_RS05600 TetR/AcrR family transcriptional regulator no 0.37
    10 DZA65_RS16005 L-serine ammonia-lyase no 0.37
    11 DZA65_RS14435 hypothetical protein no 0.37
    12 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.32 0.36
    13 DZA65_RS16520 replication protein no 0.36
    14 DZA65_RS10875 ABC transporter ATP-binding protein 0.66 0.36
    15 DZA65_RS04120 DUF2597 family protein no 0.36
    16 DZA65_RS17590 M20/M25/M40 family metallo-hydrolase no 0.36
    17 DZA65_RS09775 oxygen-insensitive NADPH nitroreductase no 0.35
    18 DZA65_RS07455 IS3 family transposase no 0.35
    19 DZA65_RS02175 DUF4102 domain-containing protein no 0.35
    20 DZA65_RS22680 TetR/AcrR family transcriptional regulator no 0.35

    Or look for negative cofitness