• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for DZA65_RS08560 from Dickeya dianthicola ME23

    type VI secretion system baseplate subunit TssG
    SEED: Uncharacterized protein ImpH/VasB
    KEGG: type VI secretion system protein ImpH

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07835 hydrogenase 4 subunit F 0.27 0.52
    2 DZA65_RS02605 oxidoreductase 0.57 0.50
    3 DZA65_RS00570 IS3 family transposase no 0.49
    4 DZA65_RS14650 NAD(P)-binding domain-containing protein no 0.47
    5 DZA65_RS12885 helix-turn-helix domain-containing protein no 0.47
    6 DZA65_RS10295 hypothetical protein no 0.47
    7 DZA65_RS11200 Expansin-YoaJ no 0.44
    8 DZA65_RS00170 ABC transporter permease no 0.44
    9 DZA65_RS08870 DUF736 domain-containing protein no 0.44
    10 DZA65_RS19885 p-aminobenzoyl-glutamate transporter no 0.43
    11 DZA65_RS04835 conjugal transfer protein TraR no 0.42
    12 DZA65_RS12250 type III secretion system export apparatus protein SctT no 0.42
    13 DZA65_RS08230 zinc-binding alcohol dehydrogenase family protein no 0.41
    14 DZA65_RS21785 lysoplasmalogenase no 0.41
    15 DZA65_RS14640 helix-turn-helix transcriptional regulator no 0.41
    16 DZA65_RS14895 Ni/Fe-hydrogenase cytochrome b subunit no 0.41
    17 DZA65_RS15405 tripartite tricarboxylate transporter permease no 0.40
    18 DZA65_RS02520 metal-dependent hydrolase 0.61 0.40
    19 DZA65_RS04580 response regulator transcription factor 0.29 0.40
    20 DZA65_RS09820 MFS transporter no 0.40

    Or look for negative cofitness