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  • Top cofit genes for DZA65_RS08545 from Dickeya dianthicola ME23

    type VI secretion system contractile sheath large subunit
    SEED: Uncharacterized protein ImpC
    KEGG: type VI secretion system protein ImpC

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04780 hypothetical protein no 0.47
    2 DZA65_RS22105 LysR family transcriptional regulator 0.22 0.41
    3 DZA65_RS09085 helix-turn-helix transcriptional regulator no 0.40
    4 DZA65_RS22440 beta-ketoacyl synthase chain length factor no 0.39
    5 DZA65_RS07685 helix-turn-helix transcriptional regulator no 0.39
    6 DZA65_RS21225 lipid III flippase WzxE 0.29 0.38
    7 DZA65_RS00410 helix-turn-helix transcriptional regulator 0.57 0.38
    8 DZA65_RS07035 hypothetical protein no 0.38
    9 DZA65_RS11675 DUF986 domain-containing protein no 0.38
    10 DZA65_RS18530 glycoside hydrolase family 1 protein no 0.38
    11 DZA65_RS16005 L-serine ammonia-lyase no 0.38
    12 DZA65_RS02370 MFS transporter no 0.38
    13 DZA65_RS08825 Hcp family type VI secretion system effector 0.21 0.37
    14 DZA65_RS03275 LLM class flavin-dependent oxidoreductase no 0.37
    15 DZA65_RS15445 YfcL family protein 0.39 0.37
    16 DZA65_RS22885 hypothetical protein no 0.37
    17 DZA65_RS06570 ribosome silencing factor no 0.37
    18 DZA65_RS01470 LysE family transporter no 0.37
    19 DZA65_RS09550 elongation factor P-like protein YeiP no 0.37
    20 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.37

    Or look for negative cofitness