Top cofit genes for DZA65_RS08360 from Dickeya dianthicola ME23

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DZA65_RS04605		helix-turn-helix transcriptional regulator	no	0.54
2	DZA65_RS04700		transposase	no	0.46
3	DZA65_RS04925		Flp pilus assembly complex ATPase component TadA	no	0.46
4	DZA65_RS20825		Hsp33 family molecular chaperone HslO	no	0.45
5	DZA65_RS14650		NAD(P)-binding domain-containing protein	no	0.42
6	DZA65_RS20545		sulfurtransferase complex subunit TusB	no	0.41
7	DZA65_RS04355		phosphoenolpyruvate-protein phosphotransferase PtsI	no	0.41
8	DZA65_RS01585		serine endoprotease DegQ	no	0.40
9	DZA65_RS12505		carboxy terminal-processing peptidase	no	0.40
10	DZA65_RS14895		Ni/Fe-hydrogenase cytochrome b subunit	no	0.39
11	DZA65_RS20795		peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA	no	0.39
12	DZA65_RS09955		LysR family transcriptional regulator	0.45	0.39
13	DZA65_RS04975		transglycosylase SLT domain-containing protein	no	0.38
14	DZA65_RS06445		M48 family metallopeptidase	no	0.38
15	DZA65_RS02525		4'-phosphopantetheinyl transferase superfamily protein	no	0.38
16	DZA65_RS11560		hypothetical protein	no	0.38
17	DZA65_RS21220		TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase	no	0.38
18	DZA65_RS12875		thiol peroxidase	no	0.38
19	DZA65_RS15995		5-(carboxyamino)imidazole ribonucleotide synthase	0.34	0.37
20	DZA65_RS22360		tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	no	0.37

Or look for negative cofitness