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  • Top cofit genes for DZA65_RS08340 from Dickeya dianthicola ME23

    thioredoxin
    SEED: putative PQQ enzyme repeat

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00235 urea carboxylase-associated family protein no 0.42
    2 DZA65_RS01480 metalloprotease PmbA no 0.42
    3 DZA65_RS11330 phenolic acid decarboxylase no 0.38
    4 DZA65_RS13505 hypothetical protein no 0.36
    5 DZA65_RS17585 ABC transporter ATP-binding protein no 0.36
    6 DZA65_RS07505 Trm112 family protein no 0.36
    7 DZA65_RS07295 oxidoreductase no 0.35
    8 DZA65_RS01935 alpha-E domain-containing protein no 0.35
    9 DZA65_RS19050 protein transport protein HofC 0.34 0.35
    10 DZA65_RS04875 hypothetical protein no 0.34
    11 DZA65_RS06525 twin-arginine translocase subunit TatE no 0.33
    12 DZA65_RS15050 DMT family permease no 0.33
    13 DZA65_RS13180 alkene reductase no 0.32
    14 DZA65_RS19910 nitrogen fixation protein NifQ 0.17 0.32
    15 DZA65_RS06705 PTS transporter subunit EIIC no 0.32
    16 DZA65_RS07055 iron-sulfur cluster carrier protein ApbC no 0.32
    17 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE no 0.32
    18 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC no 0.31
    19 DZA65_RS02145 type II toxin-antitoxin system RelE/ParE family toxin no 0.31
    20 DZA65_RS15250 hypothetical protein no 0.31

    Or look for negative cofitness