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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS08340 from
Dickeya dianthicola ME23
thioredoxin
SEED: putative PQQ enzyme repeat
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS00235
urea carboxylase-associated family protein
no
0.42
2
DZA65
_RS01480
metalloprotease PmbA
no
0.42
3
DZA65
_RS11330
phenolic acid decarboxylase
no
0.38
4
DZA65
_RS13505
hypothetical protein
no
0.36
5
DZA65
_RS17585
ABC transporter ATP-binding protein
no
0.36
6
DZA65
_RS07505
Trm112 family protein
no
0.36
7
DZA65
_RS07295
oxidoreductase
no
0.35
8
DZA65
_RS01935
alpha-E domain-containing protein
no
0.35
9
DZA65
_RS19050
protein transport protein HofC
0.34
0.35
10
DZA65
_RS04875
hypothetical protein
no
0.34
11
DZA65
_RS06525
twin-arginine translocase subunit TatE
no
0.33
12
DZA65
_RS15050
DMT family permease
no
0.33
13
DZA65
_RS13180
alkene reductase
no
0.32
14
DZA65
_RS19910
nitrogen fixation protein NifQ
0.17
0.32
15
DZA65
_RS06705
PTS transporter subunit EIIC
no
0.32
16
DZA65
_RS07055
iron-sulfur cluster carrier protein ApbC
no
0.32
17
DZA65
_RS11855
23S rRNA pseudouridine(2457) synthase RluE
no
0.32
18
DZA65
_RS08975
malonyl-ACP O-methyltransferase BioC
no
0.31
19
DZA65
_RS02145
type II toxin-antitoxin system RelE/ParE family toxin
no
0.31
20
DZA65
_RS15250
hypothetical protein
no
0.31
Or look for
negative cofitness