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  • Top cofit genes for DZA65_RS08325 from Dickeya dianthicola ME23

    ATP-binding cassette domain-containing protein
    SEED: Methionine ABC transporter ATP-binding protein
    KEGG: putative ABC transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17565 M20 family metallopeptidase no 0.52
    2 DZA65_RS12265 HAMP domain-containing protein no 0.48
    3 DZA65_RS15450 elongation factor P hydroxylase no 0.42
    4 DZA65_RS14405 type IV secretion system protein no 0.41
    5 DZA65_RS16865 sensor domain-containing diguanylate cyclase no 0.40
    6 DZA65_RS05135 DUF1738 domain-containing protein no 0.40
    7 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase no 0.40
    8 DZA65_RS13280 L,D-transpeptidase family protein no 0.39
    9 DZA65_RS19245 HTH-type transcriptional regulator SgrR 0.32 0.39
    10 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.39
    11 DZA65_RS05320 prepilin peptidase-dependent protein 0.18 0.39
    12 DZA65_RS08295 Tat pathway signal sequence domain protein no 0.38
    13 DZA65_RS14385 ATPase no 0.38
    14 DZA65_RS21745 aspartate 1-decarboxylase autocleavage activator PanM no 0.37
    15 DZA65_RS00060 DASS family sodium-coupled anion symporter no 0.37
    16 DZA65_RS10725 YeaH/YhbH family protein no 0.37
    17 DZA65_RS17165 aspartate 1-decarboxylase no 0.37
    18 DZA65_RS20015 protein nifT no 0.36
    19 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase 0.39 0.36
    20 DZA65_RS08940 cytidine deaminase no 0.36

    Or look for negative cofitness