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  • Top cofit genes for DZA65_RS08280 from Dickeya dianthicola ME23

    energy transducer TonB
    SEED: Ferric siderophore transport system, periplasmic binding protein TonB
    KEGG: periplasmic protein TonB

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS10075 HAMP domain-containing protein 0.44 0.44
    2 DZA65_RS22690 IS3 family transposase no 0.42
    3 DZA65_RS06505 ArsC family reductase 0.44 0.42
    4 DZA65_RS07690 Hcp family type VI secretion system effector no 0.40
    5 DZA65_RS05110 DNA-binding protein no 0.40
    6 DZA65_RS11825 hypothetical protein no 0.39
    7 DZA65_RS00335 DJ-1/PfpI family protein no 0.38
    8 DZA65_RS15525 sugar-binding protein no 0.37
    9 DZA65_RS21455 glutathione peroxidase no 0.36
    10 DZA65_RS08435 biotin-independent malonate decarboxylase subunit gamma no 0.36
    11 DZA65_RS01185 PLP-dependent aminotransferase family protein no 0.36
    12 DZA65_RS12665 GpE family phage tail protein no 0.36
    13 DZA65_RS11130 DNA replication terminus site-binding protein no 0.35
    14 DZA65_RS05060 hypothetical protein no 0.34
    15 DZA65_RS22175 AsmA family protein no 0.34
    16 DZA65_RS18810 GPW/gp25 family protein no 0.34
    17 DZA65_RS03510 LysE family transporter no 0.33
    18 DZA65_RS17260 class I SAM-dependent methyltransferase no 0.33
    19 DZA65_RS04500 carbohydrate ABC transporter permease no 0.33
    20 DZA65_RS10090 2-hydroxycarboxylate transporter family protein no 0.33

    Or look for negative cofitness