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  • Top cofit genes for DZA65_RS08100 from Dickeya dianthicola ME23

    siderophore biosynthesis protein SbnG
    SEED: Achromobactin biosynthesis protein AcsB, HpcH/HpaI aldolase family
    KEGG: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00695 ABC transporter permease subunit no 0.51
    2 DZA65_RS12260 peptide antibiotic transporter SbmA no 0.48
    3 DZA65_RS07995 phosphonate metabolism protein PhnP no 0.48
    4 DZA65_RS21850 dicarboxylate/amino acid:cation symporter no 0.47
    5 DZA65_RS05280 TerC family protein no 0.46
    6 DZA65_RS08935 NAD-dependent malic enzyme no 0.45
    7 DZA65_RS02100 transcriptional regulator no 0.45
    8 DZA65_RS02570 alkyl hydroperoxide reductase subunit F no 0.44
    9 DZA65_RS18890 glucosamine kinase no 0.43
    10 DZA65_RS03710 TonB-dependent siderophore receptor no 0.43
    11 DZA65_RS00790 glycosyltransferase family 4 protein no 0.42
    12 DZA65_RS04965 hypothetical protein no 0.42
    13 DZA65_RS20795 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA no 0.42
    14 DZA65_RS13845 FkbM family methyltransferase no 0.41
    15 DZA65_RS17710 YfiR family protein no 0.41
    16 DZA65_RS13175 LysR family transcriptional regulator no 0.41
    17 DZA65_RS19680 RNA chaperone Hfq no 0.41
    18 DZA65_RS08495 hypothetical protein no 0.41
    19 DZA65_RS08095 achromobactin biosynthetic protein AcsC 0.43 0.40
    20 DZA65_RS22670 type II toxin-antitoxin system HipA family toxin no 0.40

    Or look for negative cofitness