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  • Top cofit genes for DZA65_RS08085 from Dickeya dianthicola ME23

    type III PLP-dependent enzyme
    SEED: Achromobactin biosynthesis protein AcsE, Orn/DAP/Arg decarboxylase family
    KEGG: diaminopimelate decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04400 SAM-dependent methyltransferase TehB no 0.51
    2 DZA65_RS14885 HyaD/HybD family hydrogenase maturation endopeptidase no 0.47
    3 DZA65_RS08220 hypothetical protein no 0.45
    4 DZA65_RS15920 SDR family NAD(P)-dependent oxidoreductase no 0.43
    5 DZA65_RS15770 sugar ABC transporter permease no 0.42
    6 DZA65_RS09970 pyruvate formate lyase 1-activating protein no 0.39
    7 DZA65_RS18250 SH3 domain-containing protein no 0.39
    8 DZA65_RS04650 transposase no 0.39
    9 DZA65_RS05320 prepilin peptidase-dependent protein no 0.39
    10 DZA65_RS22960 hypothetical protein no 0.38
    11 DZA65_RS12215 type III secretion system inner membrane ring subunit SctD no 0.38
    12 DZA65_RS03780 PLP-dependent aminotransferase family protein no 0.38
    13 DZA65_RS00970 twin-arginine translocase subunit TatA no 0.36
    14 DZA65_RS16425 hypothetical protein no 0.36
    15 DZA65_RS09070 secretion protein HlyD no 0.36
    16 DZA65_RS03025 MFS transporter no 0.36
    17 DZA65_RS12310 amino acid ABC transporter ATP-binding protein no 0.36
    18 DZA65_RS17800 alanine--glyoxylate aminotransferase family protein 0.42 0.35
    19 DZA65_RS18930 iron-containing alcohol dehydrogenase 0.42 0.35
    20 DZA65_RS22645 GNAT family N-acetyltransferase no 0.35

    Or look for negative cofitness