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  • Top cofit genes for DZA65_RS08075 from Dickeya dianthicola ME23

    TonB-dependent receptor
    SEED: Outer membrane receptor proteins, likely involved in siderophore uptake

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS08130 ABC transporter ATP-binding protein 0.67 0.91
    2 DZA65_RS08115 iron-siderophore ABC transporter substrate-binding protein 0.53 0.90
    3 DZA65_RS11260 hypothetical protein 0.65 0.89
    4 DZA65_RS13990 flagellar basal body rod protein FlgF 0.65 0.89
    5 DZA65_RS19225 siderophore-interacting protein 0.72 0.88
    6 DZA65_RS13915 flagella biosynthesis chaperone FliJ no 0.88
    7 DZA65_RS11265 virulence factor SrfB 0.66 0.88
    8 DZA65_RS13835 RNA polymerase sigma factor FliA no 0.88
    9 DZA65_RS14010 flagellar basal body rod protein FlgB no 0.88
    10 DZA65_RS08125 iron ABC transporter permease 0.67 0.87
    11 DZA65_RS13890 flagellar hook-basal body complex protein FliE no 0.87
    12 DZA65_RS11270 virulence factor 0.66 0.87
    13 DZA65_RS13920 flagellar hook-length control protein FliK 0.65 0.87
    14 DZA65_RS06840 succinate dehydrogenase iron-sulfur subunit no 0.87
    15 DZA65_RS14015 flagellar basal body P-ring formation protein FlgA no 0.87
    16 DZA65_RS13975 flagellar basal body P-ring protein FlgI 0.51 0.87
    17 DZA65_RS13850 Gfo/Idh/MocA family oxidoreductase no 0.87
    18 DZA65_RS04420 fumarate hydratase 0.78 0.87
    19 DZA65_RS13930 flagellar motor switch protein FliM no 0.87
    20 DZA65_RS13995 flagellar hook protein FlgE 0.46 0.87

    Or look for negative cofitness