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  • Top cofit genes for DZA65_RS08050 from Dickeya dianthicola ME23

    type I-C CRISPR-associated protein Cas7/Csd2
    SEED: CRISPR-associated protein, Csd2/Csh2 family

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS22770 hypothetical protein no 0.50
    2 DZA65_RS10720 GlsB/YeaQ/YmgE family stress response membrane protein no 0.50
    3 DZA65_RS07855 hydrogenase 4 subunit B no 0.50
    4 DZA65_RS03880 ABC transporter permease no 0.50
    5 DZA65_RS19600 hypothetical protein no 0.49
    6 DZA65_RS17045 AraC family transcriptional regulator no 0.47
    7 DZA65_RS15875 transporter substrate-binding domain-containing protein no 0.46
    8 DZA65_RS14470 hypothetical protein no 0.46
    9 DZA65_RS02020 HAMP domain-containing protein no 0.45
    10 DZA65_RS07575 hypothetical protein no 0.44
    11 DZA65_RS10490 DUF72 domain-containing protein no 0.43
    12 DZA65_RS21630 tRNA (cytidine(34)-2'-O)-methyltransferase no 0.43
    13 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW no 0.43
    14 DZA65_RS08210 cyclic beta 1-2 glucan synthetase no 0.43
    15 DZA65_RS06055 SmdA family multidrug ABC transporter permease/ATP-binding protein no 0.43
    16 DZA65_RS07285 galactonate dehydratase no 0.42
    17 DZA65_RS07650 AIPR family protein no 0.42
    18 DZA65_RS18485 glycoside hydrolase family 1 protein no 0.42
    19 DZA65_RS09315 ABC transporter permease no 0.41
    20 DZA65_RS17190 GNAT family N-acetyltransferase no 0.41

    Or look for negative cofitness